dataminer: more modularity, add smartgears as dependency.

This commit is contained in:
Andrea Dell'Amico 2018-04-06 17:21:38 +02:00
parent a9b55090c4
commit 1f2a02a727
7 changed files with 133 additions and 106 deletions

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@ -1,13 +1,13 @@
---
dataminer_app_install: False
dataminer_app_upgrade: False
dataminer_algorithms_installer: True
# ZIP file
dataminer_product: prod
dataminer_zip_url: 'http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/DataMinerConfiguration/webapp/{{ dataminer_product }}/wps.zip'
# Install from WAR
dataminer_war_install: True
dataminer_wps_version: latest
dataminer_wps_name: wps
dataminer_wps_group_id: org.gcube.data-analysis
@ -32,10 +32,12 @@ dataminer_algorithms_updater_cron: present
dataminer_algorithms_updater_minute_frequency: "0"
dataminer_algorithms_updater_hour_frequency: "*"
dataminer_download_gebco_file: True
dataminer_data_file_from_thredds: 'http://thredds.d4science.org/thredds/fileServer/public/netcdf/gebco_08_OCEANS_CLIMATOLOGY_METEOROLOGY_ATMOSPHERE_.nc'
dataminer_conda_install: True
dataminer_conda_install: False
dataminer_hdf5: False
dataminer_install_nscd: False
# dev, prod, preprod
dataminer_infra_reference: dev

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@ -1,4 +1,5 @@
---
dependencies:
- { role: ../../library/roles/smartgears/smartgears-service }
- { role: ../../library/roles/conda, when: dataminer_conda_install }
- { role: ../../library/roles/hdf5, when: dataminer_hdf5 }

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@ -0,0 +1,77 @@
---
# This is only needed to force an upgrade of the algorithm importer script
- block:
- name: Remove the old dataminer algorithm installer to force an upgrade
file: path={{ smartgears_user_home }}/algorithmInstaller state=absent
- name: Remove the old dataminer algorithm installer distributions from the downloads directory
shell: rm -fr {{ smartgears_user_home }}/downloads/dataminer-algorithms-importer*.tar.gz
become: True
become_user: '{{ smartgears_user }}'
when:
- dataminer_app_install
- dataminer_algorithms_upgrade
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- block:
- name: Verify if we have the old algorithms setup
stat: path={{ smartgears_user_home }}/wps_algorithms/algorithms/AAPS_NASO_PUBLISHER.jar
register: old_algo_setup
- name: Wipe away the algoriths directory if it comes from the old setup
file: dest={{ smartgears_user_home }}/wps_algorithms state=absent
when: old_algo_setup.stat.exists
- name: Create a directory where to install the algorithms directory
file: path={{ smartgears_user_home }}/wps_algorithms/algorithms state=directory
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_svn' ]
- name: Install the subversion packages
become_user: root
apt: pkg=subversion state=present update_cache=yes cache_valid_time=1800
- name: Download the WPS algorithms from subversion
subversion: repo={{ dataminer_wps_algorithms_svn }} dest={{ smartgears_user_home }}/wps_algorithms/algorithms/{{ dataminer_infra_reference }} checkout=yes force=yes update=yes
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_svn' ]
- name: Get the algorithms installer via maven_artifact
maven_artifact: artifact_id={{ dataminer_algorithms_name }} version={{ dataminer_algorithms_version | default(omit) }} group_id={{ dataminer_algorithms_group_id }} extension={{ dataminer_algorithms_extension | default('war') }} repository_url={{ dataminer_algorithms_base_url }} dest={{ smartgears_downloads_dir }}/{{ dataminer_algorithms_file }}
register: algorithms_installer_downloaded
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- name: Remove the old dataminer algorithm installer
file: path={{ smartgears_user_home }}/algorithmInstaller state=absent
when: algorithms_installer_downloaded is changed
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- name: Unarchive the algorithms installer
unarchive: copy=no src={{ smartgears_downloads_dir }}/{{ dataminer_algorithms_file }} dest={{ smartgears_user_home }} creates='{{ smartgears_user_home }}/algorithmInstaller/addAlgorithm.sh'
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- name: Create a directory where to install the algorithms updater logs and data
file: path={{ smartgears_user_home }}/wps_algorithms_install_log state=directory
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_script' ]
- name: Install a script that updates the algorithms repository and adds the missing algorithms configurations
become_user: "{{ d4science_ansible_become_user | default('root') }}"
template: src=algorithms-updater.j2 dest=/usr/local/bin/algorithms-updater mode=0755
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_script' ]
- name: Remove the list of the installed algorithms if we are upgrading from the old algorithms setup
file: dest={{ smartgears_user_home }}/wps_algorithms_install_log/already_installed_algorithms.txt state=absent
when: old_algo_setup.stat.exists
- name: Cron job that updates the algorithms repository and adds the missing algorithms configurations
cron: name="SVN update the algorithms repository" minute="{{ dataminer_algorithms_updater_minute_frequency }}" hour="{{ dataminer_algorithms_updater_hour_frequency }}" job="/usr/local/bin/algorithms-updater > {{ smartgears_user_home }}/wps_algorithms_install_log/algorithms_updater_cron.log 2>&1" user='{{ smartgears_user }}' state={{ dataminer_algorithms_updater_cron }}
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_cron' ]
become: True
become_user: '{{ smartgears_user }}'
when:
- dataminer_app_install
- dataminer_algorithms_upgrade
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]

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@ -1,31 +1,4 @@
---
# This is only needed to force an upgrade
- block:
- name: Remove the old dataminer installation
file: path={{ smartgears_instance_path }}/webapps/{{ dataminer_wps_name }} state=absent
become: True
become_user: '{{ smartgears_user }}'
when:
- dataminer_app_install
- dataminer_app_upgrade
tags: [ 'tomcat', 'dataminer', 'wps' ]
# This is only needed to force an upgrade of the algorithm importer script
- block:
- name: Remove the old dataminer algorithm installer to force an upgrade
file: path={{ smartgears_user_home }}/algorithmInstaller state=absent
- name: Remove the old dataminer algorithm installer distributions from the downloads directory
shell: rm -fr {{ smartgears_user_home }}/downloads/dataminer-algorithms-importer*.tar.gz
become: True
become_user: '{{ smartgears_user }}'
when:
- dataminer_app_install
- dataminer_algorithms_upgrade
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- block:
- name: Get and unpack the dataminer application
maven_artifact: artifact_id={{ dataminer_wps_name }} version={{ dataminer_wps_version | default(omit) }} group_id={{ dataminer_wps_group_id }} extension={{ dataminer_wps_extension | default('war') }} repository_url={{ smartgears_global_base_url }} dest={{ smartgears_downloads_dir }}/{{ dataminer_wps_file }}
@ -47,67 +20,6 @@
template: src=web.xml.j2 dest={{ smartgears_instance_path }}/webapps/{{ dataminer_wps_name }}/WEB-INF/web.xml
notify: Restart smartgears
- name: Verify if we have the old algorithms setup
stat: path={{ smartgears_user_home }}/wps_algorithms/algorithms/AAPS_NASO_PUBLISHER.jar
register: old_algo_setup
- name: Wipe away the algoriths directory if it comes from the old setup
file: dest={{ smartgears_user_home }}/wps_algorithms state=absent
when: old_algo_setup.stat.exists
- name: Create a directory where to install the algorithms directory
file: path={{ smartgears_user_home }}/wps_algorithms/algorithms state=directory
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_svn' ]
- name: Install the subversion packages
become_user: root
apt: pkg=subversion state=present update_cache=yes cache_valid_time=1800
- name: Download the WPS algorithms from subversion
subversion: repo={{ dataminer_wps_algorithms_svn }} dest={{ smartgears_user_home }}/wps_algorithms/algorithms/{{ dataminer_infra_reference }} checkout=yes force=yes update=yes
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_svn' ]
- name: Get the algorithms installer via maven_artifact
maven_artifact: artifact_id={{ dataminer_algorithms_name }} version={{ dataminer_algorithms_version | default(omit) }} group_id={{ dataminer_algorithms_group_id }} extension={{ dataminer_algorithms_extension | default('war') }} repository_url={{ dataminer_algorithms_base_url }} dest={{ smartgears_downloads_dir }}/{{ dataminer_algorithms_file }}
register: algorithms_installer_downloaded
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- name: Remove the old dataminer algorithm installer
file: path={{ smartgears_user_home }}/algorithmInstaller state=absent
when: algorithms_installer_downloaded is changed
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- name: Unarchive the algorithms installer
unarchive: copy=no src={{ smartgears_downloads_dir }}/{{ dataminer_algorithms_file }} dest={{ smartgears_user_home }} creates='{{ smartgears_user_home }}/algorithmInstaller/addAlgorithm.sh'
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_installer' ]
- name: Create a directory where to install the algorithms updater logs and data
file: path={{ smartgears_user_home }}/wps_algorithms_install_log state=directory
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_script' ]
- name: Install a script that updates the algorithms repository and adds the missing algorithms configurations
become_user: "{{ d4science_ansible_become_user | default('root') }}"
template: src=algorithms-updater.j2 dest=/usr/local/bin/algorithms-updater mode=0755
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_script' ]
- name: Remove the list of the installed algorithms if we are upgrading from the old algorithms setup
file: dest={{ smartgears_user_home }}/wps_algorithms_install_log/already_installed_algorithms.txt state=absent
when: old_algo_setup.stat.exists
- name: Cron job that updates the algorithms repository and adds the missing algorithms configurations
cron: name="SVN update the algorithms repository" minute="{{ dataminer_algorithms_updater_minute_frequency }}" hour="{{ dataminer_algorithms_updater_hour_frequency }}" job="/usr/local/bin/algorithms-updater > {{ smartgears_user_home }}/wps_algorithms_install_log/algorithms_updater_cron.log 2>&1" user='{{ smartgears_user }}' state={{ dataminer_algorithms_updater_cron }}
tags: [ 'tomcat', 'dataminer', 'wps', 'dataminer_algorithms', 'dataminer_algorithms_cron' ]
- name: Create a directory where to install the gebco_08.nc data file
file: path={{ smartgears_user_home }}/data state=directory
- name: Install the gebco_08.nc file from thredds. It is big, mostly 2GB
get_url: url={{ dataminer_data_file_from_thredds }} dest={{ smartgears_user_home }}/data/gebco_08.nc timeout=2400
- name: Create a symlink to the gebco_08.nc file
file: src={{ smartgears_user_home }}/data/gebco_08.nc dest={{ smartgears_instance_path }}/webapps/{{ dataminer_wps_name }}/ecocfg/gebco_08.nc state=link
notify: Restart smartgears
- name: Install the old properties files
copy: src={{ item }} dest={{ smartgears_instance_path }}/webapps/{{ dataminer_wps_name }}/ecocfg/{{ item }} force=yes
with_items: '{{ dataminer_properties_files }}'
@ -125,6 +37,13 @@
file: dest={{ smartgears_user_home }}/wps_algorithms_install_log/already_installed_algorithms.txt state=absent
when: dataminer_updated is changed
become: True
become_user: '{{ smartgears_user }}'
when: dataminer_app_install
tags: [ 'tomcat', 'dataminer', 'wps' ]
- block:
- name: Install the nscd service to work around dns timeouts
become_user: root
apt: pkg=nscd state=present update_cache=yes cache_valid_time=1800
@ -140,6 +59,8 @@
become: True
become_user: '{{ smartgears_user }}'
when: dataminer_app_install
when:
- dataminer_app_install
- dataminer_install_nscd
tags: [ 'tomcat', 'dataminer', 'wps' ]

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@ -0,0 +1,20 @@
---
- block:
- name: Create a directory where to install the gebco_08.nc data file
file: path={{ smartgears_user_home }}/data state=directory
- name: Install the gebco_08.nc file from thredds. It is big, mostly 2GB
get_url: url={{ dataminer_data_file_from_thredds }} dest={{ smartgears_user_home }}/data/gebco_08.nc timeout=2400
- name: Create a symlink to the gebco_08.nc file
file: src={{ smartgears_user_home }}/data/gebco_08.nc dest={{ smartgears_instance_path }}/webapps/{{ dataminer_wps_name }}/ecocfg/gebco_08.nc state=link
notify: Restart smartgears
become: True
become_user: '{{ smartgears_user }}'
when:
- dataminer_app_install
- dataminer_download_gebco_file
tags: [ 'tomcat', 'dataminer', 'wps' ]

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@ -6,5 +6,7 @@
- name: If it is an upgrade, brutally remove the wps installation
file: dest={{ smartgears_instance_path }}/webapps/{{ dataminer_wps_name }} state=absent
when: dataminer_app_upgrade
tags: [ 'tomcat', 'dataminer', 'dataminer_upgrade', 'wps' ]
when:
- dataminer_app_install
- dataminer_app_upgrade
tags: [ dataminer', 'dataminer_upgrade', 'wps' ]

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@ -2,5 +2,9 @@
- import_tasks: dataminer-upgrade.yml
when: dataminer_app_upgrade
- import_tasks: dataminer-app.yml
when: dataminer_war_install
when: dataminer_app_install
- import_tasks: dataminer-external-files.yml
when: dataminer_app_install
- import_tasks: install-gcube-key.yml
- import_tasks: dataminer-algorithms-installer.yml
when: dataminer_algorithms_installer