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library/roles/R: Change the R updater script so that we can add a prefix to the files.

This commit is contained in:
Andrea Dell'Amico 2017-05-05 16:12:21 +02:00
parent 0b75f0e3ef
commit ba2d9ab5b2
2 changed files with 5 additions and 3 deletions
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1
R/defaults/main.yml
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@ -26,6 +26,7 @@ r_packages_updater: False
r_package_updater_via_subversion: True r_package_updater_via_subversion: True
r_package_updater_subversion_repo: http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/RConfiguration/RPackagesManagement/ r_package_updater_subversion_repo: http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/RConfiguration/RPackagesManagement/
r_packages_svn_base_dir: /srv/r_updater r_packages_svn_base_dir: /srv/r_updater
r_packages_svn_files_prefix: ''
# They need to be flat text files # They need to be flat text files
# 1 package per line # 1 package per line
#r_debian_packages_list_url #r_debian_packages_list_url

7
R/templates/update_r_packages.sh.j2
View File

@ -18,6 +18,7 @@ R_PKGS_FROM_SVN={{ r_package_updater_via_subversion }}
R_PKGS_SVN_DIR=RPackagesManagement R_PKGS_SVN_DIR=RPackagesManagement
R_PKGS_SVN_URL={{ r_package_updater_subversion_repo }} R_PKGS_SVN_URL={{ r_package_updater_subversion_repo }}
R_PKGS_SVN_BASE_DIR={{ r_packages_svn_base_dir }} R_PKGS_SVN_BASE_DIR={{ r_packages_svn_base_dir }}
R_PKGS_FILES_PREFIX={{ r_packages_svn_files_prefix }}
# - debian packages list format: # - debian packages list format:
# one package per line # one package per line
DEB_PKGS_SKIP=0 DEB_PKGS_SKIP=0
@ -124,9 +125,9 @@ function get_data_files_from_svn() {
logger "update_r_packages: first SVN checkout." logger "update_r_packages: first SVN checkout."
svn co $R_PKGS_SVN_URL >/dev/null 2>&1 svn co $R_PKGS_SVN_URL >/dev/null 2>&1
fi fi
PKGS_LIST=$R_PKGS_SVN_BASE_DIR/$R_PKGS_SVN_DIR/r_deb_pkgs.txt PKGS_LIST=$R_PKGS_SVN_BASE_DIR/$R_PKGS_SVN_DIR/${R_PKGS_FILES_PREFIX}r_deb_pkgs.txt
R_PKGS_LIST=$R_PKGS_SVN_BASE_DIR/$R_PKGS_SVN_DIR/r_cran_pkgs.txt R_PKGS_LIST=$R_PKGS_SVN_BASE_DIR/$R_PKGS_SVN_DIR/${R_PKGS_FILES_PREFIX}r_cran_pkgs.txt
R_PKGS_GITHUB=$R_PKGS_SVN_BASE_DIR/$R_PKGS_SVN_DIR/r_github_pkgs.txt R_PKGS_GITHUB=$R_PKGS_SVN_BASE_DIR/$R_PKGS_SVN_DIR/${R_PKGS_FILES_PREFIX}r_github_pkgs.txt
} }
function debian_pkgs() { function debian_pkgs() {