ansible-roles/R/defaults/main.yml

---
#
# To list the installed R packages
# Run R, then execute
# packinfo <- installed.packages (fields = c ("Package", "Version"))
# packinfo[,c("Package", "Version")]
#
# The install/remove script has been taken from here: http://adamj.eu/tech/2014/07/19/installing-and-removing-r-packages-with-ansible/
#

# Set to present if you want install from CRAN
r_install_cran_repo: absent
#r_cran_mirror_site: http://cran.rstudio.com
r_cran_set_default_mirror: True
r_cran_mirror_site: http://cran.mirror.garr.it/mirrors/CRAN/
r_base_specific_version: False
r_base_pkg_version: 2.14.1
r_packages_main_state: present
r_packages_state: '{{ r_packages_main_state }}'
r_needs_additional_distro_pkgs: False
r_plugins_from_deb: True
r_plugins_install_latest_source: True
r_plugins_install_specific_source: True
r_packages_cleanup: False

r_source_plugins_dest_dir: /var/cache/R

# r_distribution_required_packages:
#   - gdal-bin
#   - dans-gdal-scripts
#   - libgdal1-dev
#   - libgeos-dev
#   - libspatialite-dev
#   - proj
#   - proj-bin
#   - proj-data
#   - libproj-dev

r_base_packages_list:
  - r-base

# Same list as above, but without version numbers.
#r_base_packages_hold_list:
  
r_plugins_packages_list:
  - jags
  - r-cran-rjags
  - r-cran-abind
  - r-cran-boot
  - r-cran-class
  - r-cran-cluster
  - r-cran-coda
  - r-cran-codetools
  - r-cran-foreign
  - r-cran-lattice
  - r-cran-maptools
  - r-cran-mass
  - r-cran-matrix
  - r-cran-mgcv
  - r-cran-nlme
  - r-cran-nnet
  - r-cran-rpart
  - r-cran-sp
  - r-cran-spatial
  - r-cran-survival

r_plugins_list_to_install:
  - R2WinBUGS
  - R2jags
  - bayesmix
  - coda
  - rjags
  - runjags
  - base
  - compiler
  - datasets
  - grDevices
  - graphics
  - grid
  - methods
  - parallel
  - reshape
  - splines
  - stats
  - stats4
  - tcltk
  - tools
  - utils

# r_plugins_from_sources:
#   - { name: 'plyr', version: '1.7.1', source: 'plyr_1.7.1.tar.gz', url: 'http://cran.r-project.org/src/contrib/Archive/plyr/plyr_1.7.1.tar.gz' }

# r_plugins_from_github:
#   - { plugin_name: 'RFigisGeo', github_user: 'openfigis' }
#   - { plugin_name: 'rsdmx', github_user: 'opensdmx' }

# 
#r_plugins_list_to_remove: