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61 Commits

Author SHA1 Message Date
Roberto Cirillo 9f493f5297 add new checksum var 2018-10-16 18:39:54 +02:00
Andrea Dell'Amico ca7c22f72c Set the full java environment variables before running 'R CMD javareconf' 2018-10-09 11:44:05 +02:00
Andrea Dell'Amico c79bacd579 Run the java R configure command as root. 2018-10-03 18:46:43 +02:00
Andrea Dell'Amico c702469cfe Reconfigure the java environment for R. 2018-10-03 18:43:41 +02:00
Andrea Dell'Amico 202340fe65 Adapt to the new variables. Add a task that removes the old keys. 2018-07-02 20:14:28 +02:00
Andrea Dell'Amico 326466f8f8 Remove the tasks that install nscd for dataminer. Now they are global. 2018-04-19 17:48:27 +02:00
Andrea Dell'Amico 2a3c86a412 library/roles/smartgears/dataminer_app/tasks/dataminer-algorithms-installer.yml: Also install the algorithms updater script with the algorithms. Leave alone the cron job only. 2018-04-09 16:15:39 +02:00
Andrea Dell'Amico 86d22d6e75 dataminer: separate the algorithm installer from the algorithm updater. Install the algorithm installer on che core nlp VM. 2018-04-09 15:14:44 +02:00
Andrea Dell'Amico 5a4d729503 Change the dataminer roles again so that the algorithms are always installed but the script that adds them is optiona. 2018-04-07 18:32:12 +02:00
Andrea Dell'Amico 1f2a02a727 dataminer: more modularity, add smartgears as dependency. 2018-04-06 17:21:38 +02:00
Andrea Dell'Amico 3cc7c27af8 Dataminer: Remove the list of installed algorithms after an upgrade to force a reinstall. 2018-04-05 16:14:37 +02:00
Andrea Dell'Amico 9ef7736f10 Cleanup some dataminer tasks. Remove the old zip installation tasks. 2018-03-23 13:40:25 +01:00
Andrea Dell'Amico 8efc0aca14 dataminer: install nscd when requested. 2017-12-15 18:08:17 +01:00
Andrea Dell'Amico 3477ccc615 dataminer: Install the web.xml file in the correct place. 
dataminer: Remove the old wps_algorithms directory when moving from the old to the new algorithms setup.
 2017-10-13 15:15:30 +02:00
Roberto Cirillo f1fa0bc1be add new dataminer ghost instance in preproduction environment 
update dm-pool-manager service configuration and version
 2017-10-11 09:24:21 +02:00
Andrea Dell'Amico b6703aa9b1 dataminer: The algorithms directory structure has been refactored. 2017-10-06 16:05:03 +02:00
Andrea Dell'Amico 5832cb0b62 dataminer: Remove the tasks that install the missing jars. They have been added to the war file. 2017-09-28 17:21:29 +02:00
Andrea Dell'Amico 59d9e8a18c dataminer: do not install the catalina config anymore. Add some java options as requested in https://support.d4science.org/issues/9797 2017-09-26 16:28:40 +02:00
Andrea Dell'Amico 7f91b5f36a dataminer: New workarounds to fix some broken behaviour. 2017-09-19 14:44:35 +02:00
Andrea Dell'Amico c0864e4e43 dataminer: Give the possibility to not install the algorithms updater cron job. 2017-09-19 14:17:37 +02:00
Andrea Dell'Amico 11f5be1a83 dataminer: add variables that permit to change the algorithms installer run frequency. Default: 1 hour. 
dataminer proto: run the algorithm installer every minute.
 2017-09-14 14:18:22 +02:00
Andrea Dell'Amico 22632aa634 dataminer: Fix the algorithms installer script, in some situations it created duplicated lines in the file that lists the already installed algorithms. 
dataminer: Download the distribution files into /home/gcube/downloads
 2017-09-14 13:41:55 +02:00
Andrea Dell'Amico e0fa10319d Dataminer: remove the dataminer war when the new one has been downloaded from maven. 2017-09-13 16:35:12 +02:00
Andrea Dell'Amico d1597d1784 dataminer: Remove the old algorithms installer when a new distribution has been downloaded from maven. 2017-09-13 16:33:16 +02:00
Andrea Dell'Amico 84fe5ff968 library/roles/smartgears/dataminer_app: Install the algorithms importer archive, using maven_artifact. 2017-09-12 17:18:00 +02:00
Andrea Dell'Amico 0908b0bbd6 Modify the algorithms updater script so that it can manage algorithms upgrades. See https://support.d4science.org/issues/9562 2017-09-04 19:39:08 +02:00
Andrea Dell'Amico c75648ffba We need to install a templated web.xml for the dataminer app. 2017-07-25 18:37:59 +02:00
Andrea Dell'Amico 9d8ae525a2 Fix the algorithms-updater script again. 2017-07-25 17:51:26 +02:00
Andrea Dell'Amico 0ea789571b Fix the dataminer algorithms updater script: it searched the lock file in the wrong place. 2017-07-25 15:59:47 +02:00
Andrea Dell'Amico 47788be177 smartgears: Install the gcube root dev key in preprod too. 2017-07-20 17:41:42 +02:00
Andrea Dell'Amico 56eaf5e783 d4science-ghn-cluster/group_vars/all/gcube_vault_keys.yml library/roles/smartgears/dataminer_app/tasks/install-gcube-key.yml library/roles/smartgears/smartgears/tasks/install-gcube-keys.yml: New gcube keys. 2017-07-20 15:25:55 +02:00
Andrea Dell'Amico 1660fb37b0 library/roles/smartgears/dataminer_app/templates/algorithms-updater.j2: Better logging. 2017-07-19 19:18:49 +02:00
Andrea Dell'Amico d3154f5d95 library/roles/smartgears/dataminer_app: Modify the cron job that updates the algorithms. Now it also runs a tool that configures new algorithms. 2017-06-22 14:39:07 +02:00
Andrea Dell'Amico 62deaafb2c library/roles/smartgears/dataminer_app/tasks/dataminer-app.yml: Install a cron job that performs a 'svn update' of the algorithms repository. 2017-05-15 13:02:13 +02:00
Andrea Dell'Amico 9c36221e11 library/roles/smartgears/dataminer_app: Install the catalina configuration to extend the classpath. 2017-05-12 19:28:09 +02:00
Andrea Dell'Amico 766a276cc2 library/roles/smartgears/dataminer_app: The war and zip versions of dataminer need to cohesist for the time being. 2017-05-12 13:24:01 +02:00
Andrea Dell'Amico 660341fd56 library/roles/smartgears/dataminer_app/tasks/dataminer-app.yml: Copy the algorithms inside the WPS WEB-INF/lib directory. It's temporary, until Lucio finds a way to dynamically load them. 2017-05-11 20:29:08 +02:00
Andrea Dell'Amico 938f661793 library/roles/smartgears/dataminer_app/tasks/dataminer-app.yml: Fix the subversion options so the task does not fail if the repository is already present. 2017-05-10 18:21:38 +02:00
Andrea Dell'Amico f2f94af17c d4science-ghn-cluster/group_vars/dataminer_devnext/dataminer_devnext.yml: Install from gcube-snapshots. 
library/roles/smartgears/dataminer_app/tasks/dataminer-app.yml: Do not link the algorithms inside WEB-INF/lib: it does not work.
 2017-05-10 18:21:38 +02:00
Andrea Dell'Amico a5f3856141 library/roles/smartgears/dataminer_app: Fix a wrong variable name. Remove a now unused script. 2017-05-09 14:25:56 +02:00
Andrea Dell'Amico 08220160ad library/roles/smartgears/dataminer_app: Move from the zip file to a war. Install the algorithms checking them out from the subversion repository. 2017-05-09 14:25:56 +02:00
Roberto Cirillo de940474ef ../library/roles/smartgears/dataminer_app/tasks/install-gcube-key.yml added new vo keys 2017-05-02 13:48:45 +02:00
Andrea Dell'Amico 691b10ad28 library/roles/smartgears/{dataminer_app,smartgears}: Handle the SoBigData gcube key. 2017-03-29 17:32:05 +02:00
Andrea Dell'Amico 2a16a82fd0 library/roles/smartgears/dataminer_app/tasks/install-gcube-key.yml: Remove the old keys when switching environment. 
library/roles/smartgears/smartgears/templates/get-scopes.j2: Fix the creation of the container.xml file. Updates were failing because the file was not writeable.
 2017-02-09 16:34:42 +01:00
Andrea Dell'Amico 1d67e721d0 library/roles/quickrank: Fix the 'become' behaviour so that it works when remote_user is not root. 
library/roles/smartgears/dataminer_app/tasks/dataminer-app.yml: Fix the 'become' behaviour so that it works when remote_user is not root.
 2017-02-09 12:03:52 +01:00
Andrea Dell'Amico fc790625d3 library/roles/smartgears/dataminer_app/tasks/install-gcube-key.yml: Remove the non existant fourth dev gcube key reference. 2017-01-16 18:24:52 +01:00
Andrea Dell'Amico dda9366e83 library/roles/smartgears, d4science-ghn-cluster/group_vars/all/gcube_vault_keys.yml: Add the D4Research gcube key. 2016-12-21 14:18:24 +01:00
Andrea Dell'Amico fb49a65871 library/roles/smartgears/dataminer_app/tasks/dataminer-app.yml: Set a high timeout for the download from thredds. 2016-10-11 17:42:36 +02:00
Andrea Dell'Amico cc6a29ce51 library/roles/smartgears/smartgears: directly unarchive the distribution without saving the tar file locally. 2016-10-05 17:56:44 +02:00
Andrea Dell'Amico bfd5ea4d4d library/roles/smartgears/dataminer_app: Install the gebco_08.nc file on a place external to the application files and create a symlink to it. Remove the now unused tasks that installed The wps original war file. 2016-10-05 13:31:10 +02:00