From 2ee86c215c7728b12330730e4f9e6c04114b23ff Mon Sep 17 00:00:00 2001
From: Lorenzo Volpi <lorenzo.volpi@outlook.com>
Date: Thu, 9 Nov 2023 12:23:05 +0100
Subject: [PATCH] remote execution implemented

---
 conf.yaml      |   2 +-
 poetry.lock    | 809 +++++++++++++++++++++++--------------------------
 pyproject.toml |   6 +-
 quacc.log      | 106 +++++++
 remote.py      | 195 ++++++++++++
 run.py         |  24 ++
 6 files changed, 706 insertions(+), 436 deletions(-)
 create mode 100644 remote.py
 create mode 100644 run.py

diff --git a/conf.yaml b/conf.yaml
index 8ff1057..a558ac2 100644
--- a/conf.yaml
+++ b/conf.yaml
@@ -230,4 +230,4 @@ main_conf: &main_conf
       - atc_ne
       - doc_feat
 
-exec: *main_conf
\ No newline at end of file
+exec: *debug_conf
\ No newline at end of file
diff --git a/poetry.lock b/poetry.lock
index 0086afa..cec1eb3 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -126,198 +126,131 @@ files = [
 
 [[package]]
 name = "contourpy"
-version = "1.1.0"
+version = "1.2.0"
 description = "Python library for calculating contours of 2D quadrilateral grids"
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.9"
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 ]
 
 [package.dependencies]
-numpy = ">=1.16"
-
-[package.extras]
-bokeh = ["bokeh", "selenium"]
-docs = ["furo", "sphinx-copybutton"]
-mypy = ["contourpy[bokeh,docs]", "docutils-stubs", "mypy (==1.2.0)", "types-Pillow"]
-test = ["Pillow", "contourpy[test-no-images]", "matplotlib"]
-test-no-images = ["pytest", "pytest-cov", "wurlitzer"]
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+[package.dependencies]
+tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.11.0a6\" and extra == \"toml\""}
+
 [package.extras]
 toml = ["tomli"]
 
@@ -368,60 +301,86 @@ test-randomorder = ["pytest-randomly"]
 
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+tests = ["pytest", "pytest-cov", "pytest-xdist"]
+
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 ]
 
 [package.dependencies]
 contourpy = ">=1.0.1"
 cycler = ">=0.10"
 fonttools = ">=4.22.0"
-kiwisolver = ">=1.0.1"
+kiwisolver = ">=1.3.1"
 numpy = ">=1.21,<2"
 packaging = ">=20.0"
-pillow = ">=6.2.0"
+pillow = ">=8"
 pyparsing = ">=2.3.1"
 python-dateutil = ">=2.7"
-setuptools_scm = ">=7"
 
 [[package]]
 name = "numpy"
@@ -750,13 +708,13 @@ files = [
 
 [[package]]
 name = "packaging"
-version = "23.1"
+version = "23.2"
 description = "Core utilities for Python packages"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [[package]]
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 [[package]]
 name = "pandas"
-version = "2.1.1"
+version = "2.1.2"
 description = "Powerful data structures for data analysis, time series, and statistics"
 optional = false
 python-versions = ">=3.9"
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 ]
 
 [package.dependencies]
-numpy = {version = ">=1.23.2", markers = "python_version == \"3.11\""}
+numpy = [
+    {version = ">=1.22.4,<2", markers = "python_version < \"3.11\""},
+    {version = ">=1.23.2,<2", markers = "python_version == \"3.11\""},
+]
 python-dateutil = ">=2.8.2"
 pytz = ">=2020.1"
 tzdata = ">=2022.1"
@@ -904,65 +865,65 @@ invoke = ["invoke (>=2.0)"]
 
 [[package]]
 name = "pillow"
-version = "10.0.1"
+version = "10.1.0"
 description = "Python Imaging Library (Fork)"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [package.dependencies]
@@ -1099,20 +1067,22 @@ diagrams = ["jinja2", "railroad-diagrams"]
 
 [[package]]
 name = "pytest"
-version = "7.4.2"
+version = "7.4.3"
 description = "pytest: simple powerful testing with Python"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
+exceptiongroup = {version = ">=1.0.0rc8", markers = "python_version < \"3.11\""}
 iniconfig = "*"
 packaging = "*"
 pluggy = ">=0.12,<2.0"
+tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""}
 
 [package.extras]
 testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
@@ -1137,13 +1107,13 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale
 
 [[package]]
 name = "pytest-mock"
-version = "3.11.1"
+version = "3.12.0"
 description = "Thin-wrapper around the mock package for easier use with pytest"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -1258,37 +1228,37 @@ xlrd = "*"
 
 [[package]]
 name = "scikit-learn"
-version = "1.3.1"
+version = "1.3.2"
 description = "A set of python modules for machine learning and data mining"
 optional = false
 python-versions = ">=3.8"
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+    {file = "scikit_learn-1.3.2-cp39-cp39-win_amd64.whl", hash = "sha256:ed932ea780517b00dae7431e031faae6b49b20eb6950918eb83bd043237950e0"},
 ]
 
 [package.dependencies]
@@ -1341,42 +1311,6 @@ dev = ["flake8", "mypy", "pycodestyle", "typing_extensions"]
 doc = ["matplotlib (>2)", "numpydoc", "pydata-sphinx-theme (==0.9.0)", "sphinx (!=4.1.0)", "sphinx-panels (>=0.5.2)", "sphinx-tabs"]
 test = ["asv", "gmpy2", "mpmath", "pytest", "pytest-cov", "pytest-xdist", "scikit-umfpack", "threadpoolctl"]
 
-[[package]]
-name = "setuptools"
-version = "68.2.2"
-description = "Easily download, build, install, upgrade, and uninstall Python packages"
-optional = false
-python-versions = ">=3.8"
-files = [
-    {file = "setuptools-68.2.2-py3-none-any.whl", hash = "sha256:b454a35605876da60632df1a60f736524eb73cc47bbc9f3f1ef1b644de74fd2a"},
-    {file = "setuptools-68.2.2.tar.gz", hash = "sha256:4ac1475276d2f1c48684874089fefcd83bd7162ddaafb81fac866ba0db282a87"},
-]
-
-[package.extras]
-docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-hoverxref (<2)", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
-testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pip (>=19.1)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-ruff", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
-testing-integration = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "packaging (>=23.1)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"]
-
-[[package]]
-name = "setuptools-scm"
-version = "8.0.3"
-description = "the blessed package to manage your versions by scm tags"
-optional = false
-python-versions = ">=3.8"
-files = [
-    {file = "setuptools-scm-8.0.3.tar.gz", hash = "sha256:0169fd70197efda2f8c4d0b2a7a3d614431b488116f37b79d031e9e7ec884d8c"},
-    {file = "setuptools_scm-8.0.3-py3-none-any.whl", hash = "sha256:813822234453438a13c78d05c8af29918fbc06f88efb33d38f065340bbb48c39"},
-]
-
-[package.dependencies]
-packaging = ">=20"
-setuptools = "*"
-
-[package.extras]
-docs = ["entangled-cli[rich]", "mkdocs", "mkdocs-entangled-plugin", "mkdocs-material", "mkdocstrings[python]", "pygments"]
-rich = ["rich"]
-test = ["pytest", "rich", "virtualenv (>20)"]
-
 [[package]]
 name = "six"
 version = "1.16.0"
@@ -1413,6 +1347,17 @@ files = [
     {file = "threadpoolctl-3.2.0.tar.gz", hash = "sha256:c96a0ba3bdddeaca37dc4cc7344aafad41cdb8c313f74fdfe387a867bba93355"},
 ]
 
+[[package]]
+name = "tomli"
+version = "2.0.1"
+description = "A lil' TOML parser"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "tomli-2.0.1-py3-none-any.whl", hash = "sha256:939de3e7a6161af0c887ef91b7d41a53e7c5a1ca976325f429cb46ea9bc30ecc"},
+    {file = "tomli-2.0.1.tar.gz", hash = "sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"},
+]
+
 [[package]]
 name = "tqdm"
 version = "4.66.1"
@@ -1462,5 +1407,5 @@ test = ["pytest", "pytest-cov"]
 
 [metadata]
 lock-version = "2.0"
-python-versions = "^3.11"
-content-hash = "37ec2a6dc789cf3a8403a0e3481b733022329913a8153af7cc8ff6dde8570098"
+python-versions = "^3.10.12"
+content-hash = "6b6c98c2d110094d6a421c7dfd077e63009dc7f00e56fcb6a3fefc02546d2ceb"
diff --git a/pyproject.toml b/pyproject.toml
index 882e793..aec9b38 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -6,7 +6,7 @@ authors = ["Lorenzo Volpi <lorenzo.volpi@outlook.com>"]
 readme = "README.md"
 
 [tool.poetry.dependencies]
-python = "^3.11"
+python = "^3.10"
 quapy = "^0.1.7"
 pandas = "^2.0.3"
 jinja2 = "^3.1.2"
@@ -15,8 +15,7 @@ logging = "^0.4.9.6"
 
 [tool.poetry.scripts]
 main = "quacc.main:main"
-comp = "quacc.main:estimate_comparison"
-tohost = "scp_sync:scp_sync_to_host"
+run = "run:run"
 
 
 [tool.poetry.group.dev.dependencies]
@@ -36,4 +35,5 @@ build-backend = "poetry.core.masonry.api"
 
 [virtualenvs]
 in-project = true
+prefer-active-python = true
 
diff --git a/quacc.log b/quacc.log
index e2f6455..66f4502 100644
--- a/quacc.log
+++ b/quacc.log
@@ -4669,3 +4669,109 @@
 07/11/23 05:30:45| INFO        mul_sld_gs finished [took 365.9283s]
 07/11/23 05:30:45| INFO     Dataset sample 0.90 of dataset imdb_9prevs finished [took 366.4930s]
 ----------------------------------------------------------------------------------------------------
+08/11/23 20:56:59| INFO     dataset rcv1_CCAT_1prevs
+08/11/23 20:59:19| ERROR    Evaluation over rcv1_CCAT_1prevs failed. Exception: HTTP Error 403: Forbidden
+08/11/23 20:59:19| ERROR    Failed while saving configuration rcv1_CCAT_debug of rcv1_CCAT_1prevs. Exception: cannot access local variable 'dr' where it is not associated with a value
+----------------------------------------------------------------------------------------------------
+08/11/23 21:31:49| INFO     dataset rcv1_CCAT_1prevs
+08/11/23 22:01:21| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+08/11/23 22:02:41| INFO        ref finished [took 68.4653s]
+08/11/23 22:02:47| INFO        atc_mc finished [took 68.0908s]
+08/11/23 22:02:57| INFO        mulmc_sld finished [took 90.6417s]
+08/11/23 22:02:57| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 95.9050s]
+----------------------------------------------------------------------------------------------------
+08/11/23 23:22:01| INFO     dataset rcv1_CCAT_1prevs
+08/11/23 23:22:07| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+08/11/23 23:23:59| INFO        ref finished [took 98.1608s]
+08/11/23 23:24:07| INFO        atc_mc finished [took 97.2017s]
+08/11/23 23:24:18| INFO        mulmc_sld finished [took 122.6902s]
+08/11/23 23:24:18| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 130.7814s]
+----------------------------------------------------------------------------------------------------
+09/11/23 00:13:41| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 00:13:47| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 00:15:21| INFO        ref finished [took 79.7435s]
+09/11/23 00:15:30| INFO        atc_mc finished [took 80.6728s]
+09/11/23 00:15:41| INFO        mulmc_sld finished [took 107.4293s]
+09/11/23 00:15:41| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 113.6376s]
+----------------------------------------------------------------------------------------------------
+09/11/23 00:18:43| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 00:18:49| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 00:20:31| INFO        ref finished [took 87.0388s]
+09/11/23 00:20:39| INFO        atc_mc finished [took 84.1993s]
+09/11/23 00:20:50| INFO        mulmc_sld finished [took 114.1533s]
+09/11/23 00:20:50| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 120.4891s]
+----------------------------------------------------------------------------------------------------
+09/11/23 00:38:26| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 00:38:32| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 00:45:25| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 00:45:31| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 02:02:02| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 02:02:08| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 02:03:31| INFO        ref finished [took 70.0867s]
+09/11/23 02:03:41| INFO        atc_mc finished [took 72.5382s]
+09/11/23 02:03:49| INFO        mulmc_sld finished [took 95.3226s]
+09/11/23 02:03:49| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 101.1888s]
+----------------------------------------------------------------------------------------------------
+09/11/23 03:15:02| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 03:15:08| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 03:16:09| INFO        ref finished [took 51.7905s]
+09/11/23 03:16:17| INFO        atc_mc finished [took 54.5337s]
+09/11/23 03:16:29| INFO        mulmc_sld finished [took 77.7583s]
+09/11/23 03:16:29| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 81.7392s]
+----------------------------------------------------------------------------------------------------
+09/11/23 03:17:34| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 03:17:39| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 03:18:42| INFO        ref finished [took 52.5292s]
+09/11/23 03:18:49| INFO        atc_mc finished [took 54.8090s]
+09/11/23 03:18:59| INFO        mulmc_sld finished [took 75.5262s]
+09/11/23 03:18:59| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 79.5247s]
+----------------------------------------------------------------------------------------------------
+09/11/23 03:20:07| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 03:20:12| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 03:21:15| INFO        ref finished [took 53.0266s]
+09/11/23 03:21:22| INFO        atc_mc finished [took 54.2621s]
+09/11/23 03:21:34| INFO        mulmc_sld finished [took 77.6939s]
+09/11/23 03:21:34| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 81.6421s]
+----------------------------------------------------------------------------------------------------
+09/11/23 03:33:31| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 03:33:36| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 03:34:37| INFO        ref finished [took 52.0023s]
+09/11/23 03:34:45| INFO        atc_mc finished [took 54.5041s]
+09/11/23 03:34:56| INFO        mulmc_sld finished [took 76.1746s]
+09/11/23 03:34:56| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 80.1391s]
+----------------------------------------------------------------------------------------------------
+09/11/23 03:35:42| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 03:35:47| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 03:36:49| INFO        ref finished [took 52.3397s]
+09/11/23 03:36:57| INFO        atc_mc finished [took 54.5340s]
+09/11/23 03:37:09| INFO        mulmc_sld finished [took 77.3609s]
+09/11/23 03:37:09| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 81.7535s]
+----------------------------------------------------------------------------------------------------
+09/11/23 03:41:09| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 03:41:15| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 03:42:55| INFO        ref finished [took 88.9777s]
+09/11/23 03:43:09| INFO        atc_mc finished [took 98.3887s]
+09/11/23 04:15:21| DEBUG       [MultiClassAccuracyEstimator] optimization finished: best params {'quantifier__classifier__C': 10.0, 'quantifier__classifier__class_weight': None, 'quantifier__recalib': 'bcts', 'quantifier__exact_train_prev': True, 'confidence': 'entropy'} (score=0.00775) [took 2038.6779s]
+09/11/23 04:16:31| INFO        mul_sld_gs finished [took 2108.9586s]
+09/11/23 04:38:52| DEBUG       [BinaryQuantifierAccuracyEstimator] optimization finished: best params {'quantifier__classifier__C': 10.0, 'quantifier__classifier__class_weight': None, 'quantifier__recalib': 'bcts', 'quantifier__exact_train_prev': True, 'confidence': 'entropy'} (score=0.00835) [took 3453.3118s]
+09/11/23 04:46:36| INFO        bin_sld_gs finished [took 3917.2486s]
+09/11/23 04:46:36| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 3921.2338s]
+----------------------------------------------------------------------------------------------------
+09/11/23 11:52:14| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 11:52:19| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 11:53:22| INFO        ref finished [took 53.0955s]
+09/11/23 11:53:29| INFO        atc_mc finished [took 55.3922s]
+09/11/23 11:53:43| INFO        mulmc_sld finished [took 79.5846s]
+09/11/23 11:53:43| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 83.5652s]
+----------------------------------------------------------------------------------------------------
+09/11/23 11:55:48| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 11:55:53| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 11:56:54| INFO        ref finished [took 51.3170s]
+09/11/23 11:57:03| INFO        atc_mc finished [took 54.3593s]
+09/11/23 11:57:14| INFO        mulmc_sld finished [took 76.8769s]
+09/11/23 11:57:14| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs finished [took 80.8969s]
+----------------------------------------------------------------------------------------------------
+09/11/23 12:21:45| INFO     dataset rcv1_CCAT_1prevs
+09/11/23 12:21:50| INFO     Dataset sample 0.50 of dataset rcv1_CCAT_1prevs started
+09/11/23 12:22:52| INFO        ref finished [took 51.8981s]
+09/11/23 12:23:00| INFO        atc_mc finished [took 54.6032s]
diff --git a/remote.py b/remote.py
new file mode 100644
index 0000000..4c538f6
--- /dev/null
+++ b/remote.py
@@ -0,0 +1,195 @@
+import os
+import queue
+import stat
+import threading
+from itertools import product as itproduct
+from os.path import expanduser
+from pathlib import Path
+
+import paramiko
+from tqdm import tqdm
+
+known_hosts = Path(expanduser("~/.ssh/known_hosts"))
+hostname = "ilona.isti.cnr.it"
+username = "volpi"
+
+__exec_main = "cd tesi; /home/volpi/.local/bin/poetry run main"
+__exec_log = "/usr/bin/tail -f -n 0 tesi/quacc.log"
+__log_file = "quacc.log"
+__target_dir = Path("/home/volpi/tesi")
+__to_sync_up = {
+    "dir": [
+        "quacc",
+        "baselines",
+    ],
+    "file": [
+        "conf.yaml",
+        "run.py",
+    ],
+}
+__to_sync_down = {
+    "dir": [
+        "output",
+    ],
+    "file": [],
+}
+
+
+def prune_remote(sftp: paramiko.SFTPClient, remote: Path):
+    _ex_list = []
+    mode = sftp.stat(str(remote)).st_mode
+    if stat.S_ISDIR(mode):
+        for f in sftp.listdir(str(remote)):
+            _ex_list.append([prune_remote, sftp, remote / f])
+        _ex_list.append([sftp.rmdir, str(remote)])
+    elif stat.S_ISREG(mode):
+        _ex_list.append([sftp.remove, str(remote)])
+
+    return _ex_list
+
+
+def put_dir(sftp: paramiko.SFTPClient, from_: Path, to_: Path):
+    _ex_list = []
+
+    _ex_list.append([sftp.mkdir, str(to_)])
+
+    from_list = os.listdir(from_)
+    for f in from_list:
+        if (from_ / f).is_file():
+            _ex_list.append([sftp.put, str(from_ / f), str(to_ / f)])
+        elif (from_ / f).is_dir():
+            _ex_list += put_dir(sftp, from_ / f, to_ / f)
+
+    to_list = sftp.listdir(str(to_))
+    for f in to_list:
+        if f not in from_list:
+            _ex_list += prune_remote(sftp, to_ / f)
+
+    return _ex_list
+
+
+def get_dir(sftp: paramiko.SFTPClient, from_: Path, to_: Path):
+    _ex_list = []
+
+    if not (to_.exists() and to_.is_dir()):
+        _ex_list.append([os.mkdir, to_])
+
+    for f in sftp.listdir(str(from_)):
+        mode = sftp.stat(str(from_ / f)).st_mode
+        if stat.S_ISDIR(mode):
+            _ex_list += get_dir(sftp, from_ / f, to_ / f)
+            _ex_list.append([sftp.rmdir, str(from_ / f)])
+        elif stat.S_ISREG(mode):
+            _ex_list.append([sftp.get, str(from_ / f), str(to_ / f)])
+            _ex_list.append([sftp.remove, str(from_ / f)])
+
+    return _ex_list
+
+
+def sync_code(*, ssh: paramiko.SSHClient = None, verbose=False):
+    _was_ssh = ssh is not None
+    if ssh is None:
+        ssh = paramiko.SSHClient()
+        ssh.load_host_keys(known_hosts)
+        ssh.connect(hostname=hostname, username=username)
+
+    sftp = ssh.open_sftp()
+
+    to_move = [item for k, vs in __to_sync_up.items() for item in itproduct([k], vs)]
+    _ex_list = []
+    for mode, f in to_move:
+        from_ = Path(f).absolute()
+        to_ = __target_dir / f
+        if mode == "dir":
+            _ex_list += put_dir(sftp, from_, to_)
+        elif mode == "file":
+            _ex_list.append([sftp.put, str(from_), str(to_)])
+
+    for _ex in tqdm(_ex_list, desc="synching code: "):
+        fn_ = _ex[0]
+        try:
+            fn_(*_ex[1:])
+        except IOError:
+            if verbose:
+                print(f"Info: directory {to_} already exists.")
+
+    sftp.close()
+    if not _was_ssh:
+        ssh.close()
+
+
+def sync_output(*, ssh: paramiko.SSHClient = None):
+    _was_ssh = ssh is not None
+    if ssh is None:
+        ssh = paramiko.SSHClient()
+        ssh.load_host_keys(known_hosts)
+        ssh.connect(hostname=hostname, username=username)
+
+    sftp = ssh.open_sftp()
+
+    to_move = [item for k, vs in __to_sync_down.items() for item in itproduct([k], vs)]
+    _ex_list = []
+    for mode, f in to_move:
+        from_ = __target_dir / f
+        to_ = Path(f).absolute()
+        if mode == "dir":
+            _ex_list += get_dir(sftp, from_, to_)
+        elif mode == "file":
+            _ex_list.append([sftp.get, str(from_), str(to_)])
+
+    for _ex in tqdm(_ex_list, desc="synching output: "):
+        fn_ = _ex[0]
+        fn_(*_ex[1:])
+
+    sftp.close()
+    if not _was_ssh:
+        ssh.close()
+
+
+def _echo_channel(ch: paramiko.ChannelFile):
+    while line := ch.readline():
+        print(line, end="")
+
+
+def _echo_log(ssh: paramiko.SSHClient, q_: queue.Queue):
+    _, rout, _ = ssh.exec_command(__exec_log, timeout=5.0)
+    while True:
+        try:
+            with open(__log_file, "a") as f:
+                f.write(rout.readline())
+        except TimeoutError:
+            pass
+
+        try:
+            q_.get_nowait()
+            return
+        except queue.Empty:
+            pass
+
+
+def remote():
+    ssh = paramiko.SSHClient()
+    ssh.load_host_keys(known_hosts)
+    ssh.connect(hostname=hostname, username=username)
+    sync_code(ssh=ssh)
+
+    _, rout, rerr = ssh.exec_command(__exec_main)
+    q = queue.Queue()
+
+    _tlog = threading.Thread(target=_echo_log, args=[ssh, q])
+    _tlog.start()
+
+    _tchans = [threading.Thread(target=_echo_channel, args=[ch]) for ch in [rout, rerr]]
+
+    for th in _tchans:
+        th.start()
+
+    for th in _tchans:
+        th.join()
+
+    q.put(None)
+
+    sync_output(ssh=ssh)
+
+    _tlog.join()
+    ssh.close()
diff --git a/run.py b/run.py
new file mode 100644
index 0000000..73ab0c1
--- /dev/null
+++ b/run.py
@@ -0,0 +1,24 @@
+import argparse
+
+from quacc.main import main as _main
+from remote import remote as _remote
+
+
+def run_local():
+    _main()
+
+
+def run_remote():
+    _remote()
+
+
+def run():
+    parser = argparse.ArgumentParser()
+    parser.add_argument("-l", "--local", action="store_true", dest="local")
+    parser.add_argument("-r", "--remote", action="store_true", dest="remote")
+    args = parser.parse_args()
+
+    if args.local:
+        run_local()
+    elif args.remote:
+        run_remote()