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<li class="nav-item nav-item-this"><a href="">Model Selection</a></li>
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<div class="tex2jax_ignore mathjax_ignore section" id="model-selection">
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<h1>Model Selection<a class="headerlink" href="#model-selection" title="Permalink to this headline">¶</a></h1>
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<p>As a supervised machine learning task, quantification methods
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can strongly depend on a good choice of model hyper-parameters.
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The process whereby those hyper-parameters are chosen is
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typically known as <em>Model Selection</em>, and typically consists of
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testing different settings and picking the one that performed
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best in a held-out validation set in terms of any given
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evaluation measure.</p>
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<div class="section" id="targeting-a-quantification-oriented-loss">
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<h2>Targeting a Quantification-oriented loss<a class="headerlink" href="#targeting-a-quantification-oriented-loss" title="Permalink to this headline">¶</a></h2>
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<p>The task being optimized determines the evaluation protocol,
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i.e., the criteria according to which the performance of
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any given method for solving is to be assessed.
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As a task on its own right, quantification should impose
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its own model selection strategies, i.e., strategies
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aimed at finding appropriate configurations
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specifically designed for the task of quantification.</p>
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<p>Quantification has long been regarded as an add-on of
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classification, and thus the model selection strategies
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customarily adopted in classification have simply been
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applied to quantification (see the next section).
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It has been argued in <em>Moreo, Alejandro, and Fabrizio Sebastiani.
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“Re-Assessing the” Classify and Count” Quantification Method.”
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arXiv preprint arXiv:2011.02552 (2020).</em>
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that specific model selection strategies should
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be adopted for quantification. That is, model selection
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strategies for quantification should target
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quantification-oriented losses and be tested in a variety
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of scenarios exhibiting different degrees of prior
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probability shift.</p>
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<p>The class
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<em>qp.model_selection.GridSearchQ</em>
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implements a grid-search exploration over the space of
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hyper-parameter combinations that evaluates each<br />
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combination of hyper-parameters
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by means of a given quantification-oriented
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error metric (e.g., any of the error functions implemented
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in <em>qp.error</em>) and according to the
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<a class="reference external" href="https://github.com/HLT-ISTI/QuaPy/wiki/Evaluation"><em>artificial sampling protocol</em></a>.</p>
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<p>The following is an example of model selection for quantification:</p>
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<div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="kn">import</span> <span class="nn">quapy</span> <span class="k">as</span> <span class="nn">qp</span>
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<span class="kn">from</span> <span class="nn">quapy.method.aggregative</span> <span class="kn">import</span> <span class="n">PCC</span>
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<span class="kn">from</span> <span class="nn">sklearn.linear_model</span> <span class="kn">import</span> <span class="n">LogisticRegression</span>
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<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
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<span class="c1"># set a seed to replicate runs</span>
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<span class="n">np</span><span class="o">.</span><span class="n">random</span><span class="o">.</span><span class="n">seed</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
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<span class="n">qp</span><span class="o">.</span><span class="n">environ</span><span class="p">[</span><span class="s1">'SAMPLE_SIZE'</span><span class="p">]</span> <span class="o">=</span> <span class="mi">500</span>
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<span class="n">dataset</span> <span class="o">=</span> <span class="n">qp</span><span class="o">.</span><span class="n">datasets</span><span class="o">.</span><span class="n">fetch_reviews</span><span class="p">(</span><span class="s1">'hp'</span><span class="p">,</span> <span class="n">tfidf</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">min_df</span><span class="o">=</span><span class="mi">5</span><span class="p">)</span>
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<span class="c1"># The model will be returned by the fit method of GridSearchQ.</span>
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<span class="c1"># Model selection will be performed with a fixed budget of 1000 evaluations</span>
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<span class="c1"># for each hyper-parameter combination. The error to optimize is the MAE for</span>
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<span class="c1"># quantification, as evaluated on artificially drawn samples at prevalences </span>
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<span class="c1"># covering the entire spectrum on a held-out portion (40%) of the training set.</span>
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<span class="n">model</span> <span class="o">=</span> <span class="n">qp</span><span class="o">.</span><span class="n">model_selection</span><span class="o">.</span><span class="n">GridSearchQ</span><span class="p">(</span>
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<span class="n">model</span><span class="o">=</span><span class="n">PCC</span><span class="p">(</span><span class="n">LogisticRegression</span><span class="p">()),</span>
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<span class="n">param_grid</span><span class="o">=</span><span class="p">{</span><span class="s1">'C'</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">logspace</span><span class="p">(</span><span class="o">-</span><span class="mi">4</span><span class="p">,</span><span class="mi">5</span><span class="p">,</span><span class="mi">10</span><span class="p">),</span> <span class="s1">'class_weight'</span><span class="p">:</span> <span class="p">[</span><span class="s1">'balanced'</span><span class="p">,</span> <span class="kc">None</span><span class="p">]},</span>
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<span class="n">sample_size</span><span class="o">=</span><span class="n">qp</span><span class="o">.</span><span class="n">environ</span><span class="p">[</span><span class="s1">'SAMPLE_SIZE'</span><span class="p">],</span>
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<span class="n">eval_budget</span><span class="o">=</span><span class="mi">1000</span><span class="p">,</span>
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<span class="n">error</span><span class="o">=</span><span class="s1">'mae'</span><span class="p">,</span>
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<span class="n">refit</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="c1"># retrain on the whole labelled set</span>
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<span class="n">val_split</span><span class="o">=</span><span class="mf">0.4</span><span class="p">,</span>
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<span class="n">verbose</span><span class="o">=</span><span class="kc">True</span> <span class="c1"># show information as the process goes on</span>
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<span class="p">)</span><span class="o">.</span><span class="n">fit</span><span class="p">(</span><span class="n">dataset</span><span class="o">.</span><span class="n">training</span><span class="p">)</span>
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<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s1">'model selection ended: best hyper-parameters=</span><span class="si">{</span><span class="n">model</span><span class="o">.</span><span class="n">best_params_</span><span class="si">}</span><span class="s1">'</span><span class="p">)</span>
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<span class="n">model</span> <span class="o">=</span> <span class="n">model</span><span class="o">.</span><span class="n">best_model_</span>
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<span class="c1"># evaluation in terms of MAE</span>
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<span class="n">results</span> <span class="o">=</span> <span class="n">qp</span><span class="o">.</span><span class="n">evaluation</span><span class="o">.</span><span class="n">artificial_sampling_eval</span><span class="p">(</span>
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<span class="n">model</span><span class="p">,</span>
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<span class="n">dataset</span><span class="o">.</span><span class="n">test</span><span class="p">,</span>
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<span class="n">sample_size</span><span class="o">=</span><span class="n">qp</span><span class="o">.</span><span class="n">environ</span><span class="p">[</span><span class="s1">'SAMPLE_SIZE'</span><span class="p">],</span>
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<span class="n">n_prevpoints</span><span class="o">=</span><span class="mi">101</span><span class="p">,</span>
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<span class="n">n_repetitions</span><span class="o">=</span><span class="mi">10</span><span class="p">,</span>
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<span class="n">error_metric</span><span class="o">=</span><span class="s1">'mae'</span>
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<span class="p">)</span>
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<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s1">'MAE=</span><span class="si">{</span><span class="n">results</span><span class="si">:</span><span class="s1">.5f</span><span class="si">}</span><span class="s1">'</span><span class="p">)</span>
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</pre></div>
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</div>
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<p>In this example, the system outputs:</p>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span>[GridSearchQ]: starting optimization with n_jobs=1
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[GridSearchQ]: checking hyperparams={'C': 0.0001, 'class_weight': 'balanced'} got mae score 0.24987
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[GridSearchQ]: checking hyperparams={'C': 0.0001, 'class_weight': None} got mae score 0.48135
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[GridSearchQ]: checking hyperparams={'C': 0.001, 'class_weight': 'balanced'} got mae score 0.24866
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[...]
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[GridSearchQ]: checking hyperparams={'C': 100000.0, 'class_weight': None} got mae score 0.43676
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[GridSearchQ]: optimization finished: best params {'C': 0.1, 'class_weight': 'balanced'} (score=0.19982)
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[GridSearchQ]: refitting on the whole development set
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model selection ended: best hyper-parameters={'C': 0.1, 'class_weight': 'balanced'}
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1010 evaluations will be performed for each combination of hyper-parameters
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[artificial sampling protocol] generating predictions: 100%|██████████| 1010/1010 [00:00<00:00, 5005.54it/s]
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MAE=0.20342
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</pre></div>
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</div>
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<p>The parameter <em>val_split</em> can alternatively be used to indicate
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a validation set (i.e., an instance of <em>LabelledCollection</em>) instead
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of a proportion. This could be useful if one wants to have control
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on the specific data split to be used across different model selection
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experiments.</p>
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</div>
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<div class="section" id="targeting-a-classification-oriented-loss">
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<h2>Targeting a Classification-oriented loss<a class="headerlink" href="#targeting-a-classification-oriented-loss" title="Permalink to this headline">¶</a></h2>
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<p>Optimizing a model for quantification could rather be
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computationally costly.
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In aggregative methods, one could alternatively try to optimize
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the classifier’s hyper-parameters for classification.
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Although this is theoretically suboptimal, many articles in
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quantification literature have opted for this strategy.</p>
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<p>In QuaPy, this is achieved by simply instantiating the
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classifier learner as a GridSearchCV from scikit-learn.
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The following code illustrates how to do that:</p>
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<div class="highlight-python notranslate"><div class="highlight"><pre><span></span><span class="n">learner</span> <span class="o">=</span> <span class="n">GridSearchCV</span><span class="p">(</span>
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<span class="n">LogisticRegression</span><span class="p">(),</span>
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<span class="n">param_grid</span><span class="o">=</span><span class="p">{</span><span class="s1">'C'</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">logspace</span><span class="p">(</span><span class="o">-</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">10</span><span class="p">),</span> <span class="s1">'class_weight'</span><span class="p">:</span> <span class="p">[</span><span class="s1">'balanced'</span><span class="p">,</span> <span class="kc">None</span><span class="p">]},</span>
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<span class="n">cv</span><span class="o">=</span><span class="mi">5</span><span class="p">)</span>
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<span class="n">model</span> <span class="o">=</span> <span class="n">PCC</span><span class="p">(</span><span class="n">learner</span><span class="p">)</span><span class="o">.</span><span class="n">fit</span><span class="p">(</span><span class="n">dataset</span><span class="o">.</span><span class="n">training</span><span class="p">)</span>
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<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s1">'model selection ended: best hyper-parameters=</span><span class="si">{</span><span class="n">model</span><span class="o">.</span><span class="n">learner</span><span class="o">.</span><span class="n">best_params_</span><span class="si">}</span><span class="s1">'</span><span class="p">)</span>
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</pre></div>
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</div>
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<p>In this example, the system outputs:</p>
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<div class="highlight-default notranslate"><div class="highlight"><pre><span></span>model selection ended: best hyper-parameters={'C': 10000.0, 'class_weight': None}
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1010 evaluations will be performed for each combination of hyper-parameters
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[artificial sampling protocol] generating predictions: 100%|██████████| 1010/1010 [00:00<00:00, 5379.55it/s]
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MAE=0.41734
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</pre></div>
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</div>
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<p>Note that the MAE is worse than the one we obtained when optimizing
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for quantification and, indeed, the hyper-parameters found optimal
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largely differ between the two selection modalities. The
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hyper-parameters C=10000 and class_weight=None have been found
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to work well for the specific training prevalence of the HP dataset,
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but these hyper-parameters turned out to be suboptimal when the
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class prevalences of the test set differs (as is indeed tested
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in scenarios of quantification).</p>
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<p>This is, however, not always the case, and one could, in practice,
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find examples
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in which optimizing for classification ends up resulting in a better
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quantifier than when optimizing for quantification.
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Nonetheless, this is theoretically unlikely to happen.</p>
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</div>
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<h3><a href="index.html">Table of Contents</a></h3>
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<ul>
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<li><a class="reference internal" href="#">Model Selection</a><ul>
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<li><a class="reference internal" href="#targeting-a-quantification-oriented-loss">Targeting a Quantification-oriented loss</a></li>
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<li><a class="reference internal" href="#targeting-a-classification-oriented-loss">Targeting a Classification-oriented loss</a></li>
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</ul>
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