from sklearn.base import BaseEstimator from sklearn.decomposition import TruncatedSVD from sklearn.linear_model import LogisticRegression class LowRankLogisticRegression(BaseEstimator): """ An example of a classification method (i.e., an object that implements `fit`, `predict`, and `predict_proba`) that also generates embedded inputs (i.e., that implements `transform`), as those required for :class:`quapy.method.neural.QuaNet`. This is a mock method to allow for easily instantiating :class:`quapy.method.neural.QuaNet` on array-like real-valued instances. The transformation consists of applying :class:`sklearn.decomposition.TruncatedSVD` while classification is performed using :class:`sklearn.linear_model.LogisticRegression` on the low-rank space. :param n_components: the number of principal components to retain :param kwargs: parameters for the `Logistic Regression `__ classifier """ def __init__(self, n_components=100, **kwargs): self.n_components = n_components self.learner = LogisticRegression(**kwargs) def get_params(self): """ Get hyper-parameters for this estimator. :return: a dictionary with parameter names mapped to their values """ params = {'n_components': self.n_components} params.update(self.learner.get_params()) return params def set_params(self, **params): """ Set the parameters of this estimator. :param parameters: a `**kwargs` dictionary with the estimator parameters for `Logistic Regression `__ and eventually also `n_components` for `TruncatedSVD` """ params_ = dict(params) if 'n_components' in params_: self.n_components = params_['n_components'] del params_['n_components'] self.learner.set_params(**params_) def fit(self, X, y): """ Fit the model according to the given training data. The fit consists of fitting `TruncatedSVD` and then `LogisticRegression` on the low-rank representation. :param X: array-like of shape `(n_samples, n_features)` with the instances :param y: array-like of shape `(n_samples, n_classes)` with the class labels :return: `self` """ nF = X.shape[1] self.pca = None if nF > self.n_components: self.pca = TruncatedSVD(self.n_components).fit(X) X = self.transform(X) self.learner.fit(X, y) self.classes_ = self.learner.classes_ return self def predict(self, X): """ Predicts labels for the instances `X` embedded into the low-rank space. :param X: array-like of shape `(n_samples, n_features)` instances to classify :return: a `numpy` array of length `n` containing the label predictions, where `n` is the number of instances in `X` """ X = self.transform(X) return self.learner.predict(X) def predict_proba(self, X): """ Predicts posterior probabilities for the instances `X` embedded into the low-rank space. :param X: array-like of shape `(n_samples, n_features)` instances to classify :return: array-like of shape `(n_samples, n_classes)` with the posterior probabilities """ X = self.transform(X) return self.learner.predict_proba(X) def transform(self, X): """ Returns the low-rank approximation of `X` with `n_components` dimensions, or `X` unaltered if `n_components` >= `X.shape[1]`. :param X: array-like of shape `(n_samples, n_features)` instances to embed :return: array-like of shape `(n_samples, n_components)` with the embedded instances """ if self.pca is None: return X return self.pca.transform(X)