diff --git a/smartgears/dataminer_app/defaults/main.yml b/smartgears/dataminer_app/defaults/main.yml index e13c2994..220ec705 100644 --- a/smartgears/dataminer_app/defaults/main.yml +++ b/smartgears/dataminer_app/defaults/main.yml @@ -10,7 +10,9 @@ dataminer_52north_webapp_file: 52n-wps-webapp-3.3.2-20150523.010021-9.war dataminer_52north_webapp_url: 'http://data.d4science.org/uri-resolver/id?fileName=wps-3.3.2.war&smp-id=565d67b7e4b0eacf4a0fc5ad&contentType=application%2Fx-tika-java-web-archive' dataminer_maven_enable_gcube_snapshots: False #dataminer_dataminer_jar_version: 1.0.1-3.10.0 -dataminer_dataminer_jar_version: 1.0.2-3.10.1 +#dataminer_dataminer_jar_version: 1.0.2-3.10.1 +dataminer_dataminer_jar_version: 1.2.0-SNAPSHOT + dataminer_dataminer_jar_version_range: "[1.0.0-SNAPSHOT,2.0.0-SNAPSHOT)" dataminer_gcube_web_xml: "http://data.d4science.org/id?fileName=web.xml&smp-id=56615ae0e4b0158fcb561817&contentType=application%2Fxml" diff --git a/smartgears/dataminer_app/templates/pom.xml.j2 b/smartgears/dataminer_app/templates/pom.xml.j2 index 31c169ac..e4136077 100644 --- a/smartgears/dataminer_app/templates/pom.xml.j2 +++ b/smartgears/dataminer_app/templates/pom.xml.j2 @@ -29,6 +29,10 @@ common-encryption org.gcube.core + + common-scope-maps + org.gcube.core + @@ -105,6 +109,14 @@ org.slf4j + + common-scope-maps + org.gcube.core + + + common-encryption + org.gcube.core + org.gcube.dataanalysis @@ -185,6 +197,22 @@ + + javassist + javassist + 3.12.1.GA + + + org.gcube.common + home-library-jcr + [2.0.0-SNAPSHOT,3.0.0-SNAPSHOT) + + + + org.gcube.common + home-library + [2.0.0-SNAPSHOT,3.0.0-SNAPSHOT) + diff --git a/smartgears/dataminer_app/templates/wps_config.xml.j2 b/smartgears/dataminer_app/templates/wps_config.xml.j2 index f721481f..2ce37c5c 100644 --- a/smartgears/dataminer_app/templates/wps_config.xml.j2 +++ b/smartgears/dataminer_app/templates/wps_config.xml.j2 @@ -57,57 +57,104 @@ - + -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.DBSCAN -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.KMEANS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.LOF -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.XMEANS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.DISCREPANCY_ANALYSIS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.HRS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.MAPS_COMPARISON -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.QUALITY_ANALYSIS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.BIONYM -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.CMSY -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.ICCAT_VPA -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ABSENCE_CELLS_FROM_AQUAMAPS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.BIONYM_LOCAL -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.CSQUARE_COLUMN_CREATOR -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ESRI_GRID_EXTRACTION -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.FAO_OCEAN_AREA_COLUMN_CREATOR -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.FAO_OCEAN_AREA_COLUMN_CREATOR_FROM_QUADRANT -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.GENERIC_CHARTS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.GEO_CHART +org.n52.wps.demo.TestIO org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.HCAF_FILTER -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.MAX_ENT_NICHE_MODELLING -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_MOST_OBSERVED_SPECIES -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_MOST_OBSERVED_TAXA -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_SINGLE_SPECIES_DISTRIBUTION_PER_AREA -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_SPECIES_OBSERVATIONS_PER_LME_AREA -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_SPECIES_OBSERVATIONS_PER_MEOW_AREA -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_SPECIES_OBSERVATIONS_PER_YEAR -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OBIS_TAXA_OBSERVATIONS_PER_YEAR -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCE_ENRICHMENT +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ABSENCE_CELLS_FROM_AQUAMAPS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ABSENCE_GENERATION_FROM_OBIS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.BIOCLIMATE_HCAF +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.BIOCLIMATE_HSPEC +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.BIOCLIMATE_HSPEN +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.BIONYM_LOCAL +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCES_DUPLICATES_DELETER +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCES_INTERSECTOR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCES_MARINE_TERRESTRIAL +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCES_MERGER +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCES_SUBTRACTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.HCAF_INTERPOLATION org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.PRESENCE_CELLS_GENERATION -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.RASTER_DATA_PUBLISHER -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SGVM_INTERPOLATION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.MOST_OBSERVED_SPECIES +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.MOST_OBSERVED_TAXA +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SPECIES_OBSERVATIONS_PER_AREA +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SPECIES_OBSERVATIONS_TREND_PER_YEAR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SPECIES_OBSERVATION_LME_AREA_PER_YEAR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SPECIES_OBSERVATION_MEOW_AREA_PER_YEAR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.TAXONOMY_OBSERVATIONS_TREND_PER_YEAR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.GETTABLEDETAILS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.LISTDBINFO +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.LISTDBNAMES +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.LISTDBSCHEMA +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.LISTTABLES +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.RANDOMSAMPLEONTABLE +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SAMPLEONTABLE +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SMARTSAMPLEONTABLE org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SUBMITQUERY +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.XYEXTRACTOR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.XYEXTRACTOR_TABLE +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ZEXTRACTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ZEXTRACTION_TABLE org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.TIMEEXTRACTION org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.TIMEEXTRACTION_TABLE org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.TIME_GEO_CHART org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.TIME_SERIES_ANALYSIS org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.TIME_SERIES_CHARTS -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.XYEXTRACTOR -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.XYEXTRACTOR_TABLE -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ZEXTRACTION -org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ZEXTRACTION_TABLE -org.n52.wps.demo.TestIO - +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.KNITR_COMPILER +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SGVM_INTERPOLATION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.MAX_ENT_NICHE_MODELLING +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SEADATANET_INTERPOLATOR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.RASTER_DATA_PUBLISHER +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.GEO_CHART +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ESRI_GRID_EXTRACTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.OCCURRENCE_ENRICHMENT +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.POLYGONS_TO_MAP +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SPECIES_MAP_FROM_CSQUARES +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.SPECIES_MAP_FROM_POINTS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.GENERIC_CHARTS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.POINTS_TO_MAP +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.CSQUARES_TO_COORDINATES +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.CSQUARE_COLUMN_CREATOR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.FAO_OCEAN_AREA_COLUMN_CREATOR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.FAO_OCEAN_AREA_COLUMN_CREATOR_FROM_QUADRANT +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.GRID_CWP_TO_COORDINATES +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.EGIP_ENERGY_AGGREGATED_DISTRIBUTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.EGIP_ENERGY_COUNTRY_DISTRIBUTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.EGIP_ENERGY_TRENDS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.EGIP_ENERGY_YEAR_DISTRIBUTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ECOPATH_WITH_ECOSIM +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ESTIMATE_FISHING_ACTIVITY +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.ESTIMATE_MONTHLY_FISHING_EFFORT +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.WEB_APP_PUBLISHER +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.HRS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.QUALITY_ANALYSIS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.DISCREPANCY_ANALYSIS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.evaluators.MAPS_COMPARISON +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.DBSCAN +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.LOF +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.KMEANS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.clusterers.XMEANS +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.modellers.AQUAMAPSNN +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.BIONYM +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.LWR +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.modellers.HSPEN +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.CCAMLRGETSPECIES_TEST +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.ICCAT_VPA +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.CMSY +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.modellers.FEED_FORWARD_ANN +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.BIONYM_BIODIV +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.AQUAMAPS_NATIVE +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.AQUAMAPS_NATIVE_2050 +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.AQUAMAPS_SUITABLE +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.AQUAMAPS_SUITABLE_2050 +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.FAOMSY +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.generators.FEED_FORWARD_A_N_N_DISTRIBUTION +org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses.transducerers.CCAMLR_EXPORTER_TOOL + - +