forked from ISTI-ansible-roles/ansible-roles
108 lines
3.4 KiB
YAML
108 lines
3.4 KiB
YAML
---
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#
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# There's an untrusted Ubuntu PPA repository with gobs of packages and dependencies: https://launchpad.net/~marutter/+archive/ubuntu/c2d4u NOT TESTED
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#
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# To list the installed R packages
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# Run R, then execute
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# packinfo <- installed.packages (fields = c ("Package", "Version"))
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# packinfo[,c("Package", "Version")]
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#
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# The install/remove script has been taken from here: http://adamj.eu/tech/2014/07/19/installing-and-removing-r-packages-with-ansible/
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#
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# Set to present if you want install from CRAN
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r_install_cran_repo: absent
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#r_cran_mirror_site: http://cran.rstudio.com
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r_cran_set_default_mirror: True
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r_cran_mirror_site: http://cran.mirror.garr.it/mirrors/CRAN/
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r_base_specific_version: False
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r_base_pkg_version: 2.14.1
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r_packages_main_state: present
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r_packages_state: '{{ r_packages_main_state }}'
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r_plugins_from_deb: True
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r_packages_cleanup: False
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r_packages_updater: False
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# They need to be flat text files available via http
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# 1 package per line
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#r_debian_packages_list_url
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# package[:cran mirror]
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# The CRAN mirror URL is optional
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#r_cran_packages_list_url
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# user/package_name
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#r_github_packages_list_url
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r_source_plugins_dest_dir: /var/cache/R
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# r_distribution_required_packages:
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# - gdal-bin
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# - dans-gdal-scripts
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# - libgdal1-dev
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# - libgeos-dev
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# - libspatialite-dev
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# - proj
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# - proj-bin
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# - proj-data
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# - libproj-dev
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r_base_packages_list:
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- r-base
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# Same list as above, but without version numbers.
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#r_base_packages_hold_list:
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r_plugins_packages_list:
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- jags
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- r-cran-rjags
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- r-cran-abind
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- r-cran-boot
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- r-cran-class
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- r-cran-cluster
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- r-cran-coda
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- r-cran-codetools
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- r-cran-foreign
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- r-cran-lattice
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- r-cran-maptools
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- r-cran-mass
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- r-cran-matrix
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- r-cran-mgcv
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- r-cran-nlme
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- r-cran-nnet
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- r-cran-rpart
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- r-cran-sp
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- r-cran-spatial
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- r-cran-survival
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# r_plugins_list_to_install:
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# - { name: 'R2WinBUGS', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'R2jags', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'bayesmix', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'coda', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'rjags', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'runjags', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'base', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'compiler', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'datasets', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'grDevices', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'graphics', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'grid', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'methods', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'parallel', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'reshape', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'splines', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'stats', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'stats4', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'tcltk', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'tools', repo: '{{ r_cran_mirror_site }}' }
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# - { name: 'utils', repo: '{{ r_cran_mirror_site }}' }
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# r_plugins_from_sources:
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# - { name: 'plyr', version: '1.7.1', source: 'plyr_1.7.1.tar.gz', url: 'http://cran.r-project.org/src/contrib/Archive/plyr/plyr_1.7.1.tar.gz' }
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# r_plugins_from_github:
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# - { plugin_name: 'RFigisGeo', github_user: 'openfigis' }
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# - { plugin_name: 'rsdmx', github_user: 'opensdmx' }
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#
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#r_plugins_list_to_remove:
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